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Estimating infectious disease parameters from data on social contacts and serological status

机译:根据社交联系数据估算传染病参数   和血清学状况

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摘要

In dynamic models of infectious disease transmission, typically variousmixing patterns are imposed on the so-called Who-Acquires-Infection-From-Whommatrix (WAIFW). These imposed mixing patterns are based on prior knowledge ofage-related social mixing behavior rather than observations. Alternatively, onecan assume that transmission rates for infections transmitted predominantlythrough non-sexual social contacts, are proportional to rates of conversationalcontact which can be estimated from a contact survey. In general, however,contacts reported in social contact surveys are proxies of those events bywhich transmission may occur and there may exist age-specific characteristicsrelated to susceptibility and infectiousness which are not captured by thecontact rates. Therefore, in this paper, transmission is modeled as the productof two age-specific variables: the age-specific contact rate and anage-specific proportionality factor, which entails an improvement of fit forthe seroprevalence of the varicella-zoster virus (VZV) in Belgium. Furthermore,we address the impact on the estimation of the basic reproduction number, usingnon-parametric bootstrapping to account for different sources of variabilityand using multi-model inference to deal with model selection uncertainty. Theproposed method makes it possible to obtain important information ontransmission dynamics that cannot be inferred from approaches traditionallyapplied hitherto.
机译:在传染病传播的动态模型中,通常将各种混合模式强加于所谓的“谁要获取感染来自母体”(WAIFW)的位置。这些强加的混合模式基于与年龄相关的社会混合行为的先验知识,而不是观察结果。或者,可以假设主要通过非性社会接触传播的感染的传播率与可以从接触调查中估计的对话接触率成比例。但是,总的来说,社会接触调查中报告的接触者是可能发生传播的那些事件的代理,并且可能存在与易感性和传染性有关的特定年龄特征,而这些特征并未被接触率所捕获。因此,在本文中,传播被建模为两个特定年龄变量的乘积:特定年龄接触率和特定年龄比例因子,这需要改善比利时水痘带状疱疹病毒(VZV)的血清阳性率。此外,我们使用非参数自举法来说明不同的变异性来源,并使用多模型推理来处理模型选择的不确定性,从而解决对基本复制数量估计的影响。所提出的方法使得可以获得关于传输动力学的重要信息,而这些信息不能从迄今传统上采用的方法中推论得出。

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